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What is the Pango lineage designation of the original Omicron variant? Answer with the lineage code only, e.g. 'A.1.2'.

Answer

B.1.1.529
lineage_system
Pango (Phylogenetic Assignment of Named Global Outbreak) lineage nomenclature
original_omicron
the initial Omicron variant of concern as designated by WHO on 2021-11-26, corresponding to Pango lineage B.1.1.529 (distinct from its later BA.1/BA.2/etc. sublineages)
sources
, cdc mmwr, genomic surveillance for sars-cov-2 variants (https://www.cdc.gov/mmwr/volumes/71/wr/mm7106a4.htm); pango network, omicron family and sublineages (https://pango.network/lineage-nomenclature/sublineage-catalog/omicron-family-and-its-sublineages)., cov-lineages.org, en.wikipedia.org, pango.network, raw.githubusercontent.com, who (https://www.who.int/en/activities/tracking-sars-cov-2-variants/) and outbreak.info/cov-lineages pango lineage report, both stating omicron corresponds to pango lineage b.1.1.529, who technical advisory group on virus evolution designation, 2021-11-26: omicron corresponds to pango lineage b.1.1.529 (https://www.who.int/news/item/26-11-2021-classification-of-omicron-(b.1.1.529)-sars-cov-2-variant-of-concern), who tracking of sars-cov-2 variants of concern (https://www.who.int/en/activities/tracking-sars-cov-2-variants/) and pango lineage designation b.1.1.529, first reported to pango on 2021-11-24 (covpango/gisaid lineage records)., who tracking sars-cov-2 variants (who.int/en/activities/tracking-sars-cov-2-variants) and pango lineages designation repository (github.com/cov-lineages/pango-designation), both of which designate omicron as pango lineage b.1.1.529, who tracking sars-cov-2 variants page (2021-11-26 classification of omicron as b.1.1.529); pango lineage designation is also documented in the original pango network lineage notes (cov-lineages.org) for b.1.1.529, who tracking sars-cov-2 variants page (designated omicron as lineage b.1.1.529 on 2021-11-26); cdc covid data tracker variant proportions page, which lists 'b.1.1.529 (omicron)' as the pango lineage designation, who tracking sars-cov-2 variants page (https://www.who.int/en/activities/tracking-sars-cov-2-variants/) designating omicron as pango lineage b.1.1.529; corroborated by outbreak.info/cov-lineages pango lineage report for b.1.1.529 listing who label 'omicron', who tracking sars-cov-2 variants page (omicron = b.1.1.529) and pango lineage designation records (pango-designation github / cov-lineages.org), who tracking sars-cov-2 variants page (who.int) and pango lineage designation announcement (cov-lineages.org / outbreak.info), 2021-11-26: omicron was designated pango lineage b.1.1.529, who tracking sars-cov-2 variants page (who.int), which designates omicron as pango lineage b.1.1.529, corroborated by the pango-designation github repository (github.com/cov-lineages/pango-designation)., who tracking sars-cov-2 variants page (who.int/en/activities/tracking-sars-cov-2-variants) designates omicron as pango lineage b.1.1.529; cdc and pango network (cov-lineages.org) concur., who tracking sars-cov-2 variants page (who.int/en/activities/tracking-sars-cov-2-variants) listing omicron = pango lineage b.1.1.529; corroborated by cdc and pango network (cov-lineages.org) designation records, who tracking sars-cov-2 variants page and cdc omicron variant page, both identifying b.1.1.529 as the pango lineage designated omicron (voc) on 2021-11-26., who tracking sars-cov-2 variants page and cdc/nextstrain reporting designate the original omicron variant as pango lineage b.1.1.529, first reported to who on 2021-11-24., who tracking sars-cov-2 variants page and cdc/pango lineage designation, which identify b.1.1.529 as the pango lineage of the omicron variant designated a variant of concern on 2021-11-26, who tracking sars-cov-2 variants page and cov-lineages.org / pango designation issue #361 (2021-11-24), both identifying the original omicron variant as pango lineage b.1.1.529, who tracking sars-cov-2 variants page and outbreak.info / pango lineage designation: omicron voc was first designated pango lineage b.1.1.529 on 2021-11-26 (later including descendant sublineages ba.1, ba.2, etc., but the original designation is b.1.1.529), who tracking sars-cov-2 variants page and outbreak.info lineage report both identify b.1.1.529 as the pango lineage designated 'omicron' on 2021-11-26, who tracking sars-cov-2 variants page and pango lineage designation (cov-lineages.org / outbreak.info), which both list b.1.1.529 as the original omicron lineage, who tracking sars-cov-2 variants page and pango lineage designation b.1.1.529 (assigned 2021-11-26) for the omicron voc, who tracking sars-cov-2 variants page and pango lineage designation b.1.1.529 (https://www.who.int/en/activities/tracking-sars-cov-2-variants/) plus outbreak.info lineage report for b.1.1.529, who tracking sars-cov-2 variants page and pango lineage designation b.1.1.529, publicly documented as the original omicron lineage assigned on 2021-11-24, who tracking sars-cov-2 variants page and pango lineage designation notes (cov-lineages.org), which state omicron = b.1.1.529, who tracking sars-cov-2 variants page: omicron is assigned pango lineage b.1.1.529 (parent lineage of ba.1/ba.2/etc.); also corroborated by cdc and nextstrain lineage nomenclature pages., who tracking sars-cov-2 variants page; pango lineage designation b.1.1.529 (also referenced by cdc and gisaid), who variant classification (2021-11-26) designating omicron as the pango lineage b.1.1.529; corroborated by cov-lineages.org lineage description for b.1.1.529, who variant classification (24 november 2021) and pango lineage designation, which assigned the original omicron variant the pango lineage b.1.1.529, who variant classification (https://www.who.int/en/activities/tracking-sars-cov-2-variants/) and pango lineage designation records (cov-lineages.org / outbreak.info): the original omicron variant, first reported in november 2021, was assigned the pango lineage b.1.1.529., who variant classification (https://www.who.int/en/activities/tracking-sars-cov-2-variants/) designates omicron as pango lineage b.1.1.529, first reported from south africa/botswana in november 2021; this designation is also documented on outbreak.info and covlineages.org (cov-lineages.org/lineage_list.html)., who variant classification (omicron designated b.1.1.529, 26 nov 2021) and pango lineage designation system (cov-lineages.org / pango-designation), which assigned b.1.1.529 as the original omicron lineage, who variant classification tracking page (who.int/en/activities/tracking-sars-cov-2-variants) and pango lineage designation records (cov-lineages.org / gisaid), which designate b.1.1.529 as the pango lineage of the omicron variant of concern first reported from south africa/botswana in november 2021, who variant tracking (https://www.who.int/en/activities/tracking-sars-cov-2-variants/) designates omicron as pango lineage b.1.1.529; cdc and pango network (cov-lineages.org) confirm b.1.1.529 as the original omicron designation, first identified in botswana/south africa in november 2021., who variant tracking (who.int/en/activities/tracking-sars-cov-2-variants) and pango-designation github repository (cov-lineages/pango-designation), which both designate the original omicron variant (first detected november 2021, south africa/botswana) as pango lineage b.1.1.529, who variant tracking designated omicron as pango lineage b.1.1.529 on 2021-11-26 (https://www.who.int/en/activities/tracking-sars-cov-2-variants/); confirmed by outbreak.info / pango-designation lineage notes for b.1.1.529., who variant tracking page (https://www.who.int/activities/tracking-sars-cov-2-variants) and outbreak.info lineage report for b.1.1.529, both identifying omicron as pango lineage b.1.1.529, who variant tracking page (omicron / b.1.1.529, designated voc 2021-11-26); pango lineage database (cov-lineages.org) assignment b.1.1.529, who variant tracking page (tracking sars-cov-2 variants) and pango lineage designation b.1.1.529, https://www.who.int/en/activities/tracking-sars-cov-2-variants/, who variant tracking page (who.int tracking sars-cov-2 variants) and outbreak.info/situation-reports/omicron, both of which identify omicron as pango lineage b.1.1.529, first designated by the pango network on 2021-11-24, who variant tracking page (who.int/en/activities/tracking-sars-cov-2-variants) and outbreak.info lineage report, both identifying omicron as pango lineage b.1.1.529, designated 2021-11-26, who variant tracking page (who.int/en/activities/tracking-sars-cov-2-variants) and outbreak.info pango lineage report for b.1.1.529, both list b.1.1.529 as the pango lineage of the original omicron variant designated a variant of concern on 2021-11-26, who variant tracking page (who.int/en/activities/tracking-sars-cov-2-variants) and outbreak.info/situation-reports, which both designate b.1.1.529 as the pango lineage of the original omicron variant of concern, who variant tracking page (who.int/en/activities/tracking-sars-cov-2-variants) and pango lineage designation notes (github.com/cov-lineages/pango-designation), which both identify omicron as pango lineage b.1.1.529, who variant tracking page and pango lineage designation system (cov-lineages.org): the original omicron variant was designated pango lineage b.1.1.529 on 2021-11-26 by the pango network / cov-lineages.org, corroborated by cdc and ecdc variant classification pages., who, annex 2 previous vocs and definitions (table lists omicron parent lineage as b.1.1.529): https://www.who.int/docs/default-source/coronaviruse/annex2_previous_vocs_and_definitions.pdf; cdc, science brief: omicron (b.1.1.529) variant (lists pango lineage b.1.1.529): https://stacks.cdc.gov/view/cdc/112204/cdc_112204_ds1.pdf, who, classification of omicron (b.1.1.529): https://www.who.int/news/item/26-11-2021-classification-of-omicron-%28b.1.1.529%29-sars-cov-2-variant-of-concern; cdc mmwr, genomic surveillance for sars-cov-2 variants: https://www.cdc.gov/mmwr/volumes/71/wr/mm7106a4.htm, who, classification of omicron (b.1.1.529): https://www.who.int/news/item/26-11-2021-classification-of-omicron-%28b.1.1.529%29-sars-cov-2-variant-of-concern; pango network, notable lineages: https://pango.network/lineages/notable-lineages, who, classification of omicron (b.1.1.529): sars-cov-2 variant of concern, 2021-11-26; https://www.who.int/news/item/26-11-2021-classification-of-omicron-%28b.1.1.529%29-sars-cov-2-variant-of-concern, world health organization, 'tracking sars-cov-2 variants' (https://www.who.int/activities/tracking-sars-cov-2-variants) — designates omicron as pango lineage b.1.1.529, first documented 2021-11-24 and named 2021-11-26; corroborated by cdc and pango network (cov-lineages.org) lineage notes., www.cdc.gov, www.ecdc.europa.eu, www.who.int, wwwnc.cdc.gov

Work

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  2. answered145 of 146 agreed140 needed
    #912B.1.1.529WHO Tracking SARS-CoV-2 variants page and CDC/Pango lineage designation, which identify B.1.1.529 as the Pango lineage of the Omicron variant designated a Variant of Concern on 2021-11-26
    #367B.1.1.529from www.who.int
    #1723B.1.1.529from www.who.int
    #948B.1.1.529from www.ecdc.europa.eu
    #52B.1.1.529from www.who.int
    141 more
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